SCHISM/SELFE/ELCIRC journal papers

Papers in Ocean Modelling Special Issue "In silico oceanography via seamless cross-scale modeling: Are we there yet?" and "Cross-Scale Processes in Ocean Modelling"
  1. Zhang, Y., Anderson, J., Park, K., Wu, C.H., Wipperfurth, S., Anderson, E., Pe'eri, S., Beletsky, D., Titze, D., Di Lorenzo, E., Moghimi, S., Seroka, G., Myers, E., Fujisaki-Manome, A., Kelley, J. (2024) Debunking common myths in coastal circulation modeling, Ocean Modelling, 190, 102401, https://doi.org/10.1016/j.ocemod.2024.102401 link
  2. Cui, L., Ye, F., Zhang, Y., Yu, H.C., Wang, Z., Moghimi, S., Seroka, G., Riley, J., Pe'eri, S., Mani, S., Myers, E.P., Park, K., Tang, L., Yang, Z., Wang, Y.M. (2024) Total water level prediction at continental scale: Coastal ocean, Ocean Modelling, 192, 102451, https://doi.org/10.1016/j.ocemod.2024.102451
  3. Pein, J., Staneva, J., Biederbick, J., Schrum, C. (2025) Model-based assessment of sustainable adaptation options for an industrialised meso‑tidal estuary, Ocean Modelling, 194, 102467. https://doi.org/10.1016/j.ocemod.2024.102467
  4. Zhang, Y., Anderson, J., Wu, C.H., Beletsky, D., Liu, Y., Huang, W., Anderson, E.J., Moghimi, S., Myers, E. (2025) Cross-scale prediction for the Laurentian Great Lakes, Ocean Modelling, Volume 194, 102512, https://doi.org/10.1016/j.ocemod.2025.102512
  5. Hosseini, S.T., Pein, J., Staneva, J., Zhang, Y., Stanev, E. (2025) Impact of offshore wind farm monopiles on hydrodynamics interacting with wind-driven waves, Ocean Modelling, 195, https://doi.org/10.1016/j.ocemod.2025.102521
  6. Coulet, P., Durand, F., Fassoni-Andrade, A., Khan, J.,Testut, L., Toublanc, F., Guedes Santos, L., Medeiros Moreira, D. (2025) Assessment of the hydrodynamical signature of the record-breaking 2021 flood along the Amazon estuary, Ocean Modelling, https://doi.org/10.1016/j.ocemod.2025.102536
  7. Yu, H., Zhang, Y., Nerger, L., Lemmen, C., Yu, J.C.S., Chou, T., Chu, C., Terng,C. (2025) Development of a flexible data assimilation system for a 3D unstructured-grid ocean model under Earth System Modeling Framework, Ocean Modelling, 196, 102546, https://doi.org/10.1016/j.ocemod.2025.102546 link
  8. Park, K., Zhang, Y., Di Lorenzo, E., Seroka, G., Fujisaki-Manome, A., Pe'eri, S., Moghimi, S., Kelley, J.G.W. (2025) Evaluation of a 3D Unstructured Grid Model for the New York-New Jersey Harbor under Different Forcing Sources, Ocean Modelling, 197, 102598. https://doi.org/10.1016/j.ocemod.2025.102598
  9. Yoo, H., Yu, H., Zhang, Y., Wu, W.F., Ye, F., Moghimi, S., Seroka, G., Yang, Z., and Myers, E.P. (2026) A bias correction method for total water level prediction at continental scale, Ocean Modelling, 199, 102642. https://doi.org/10.1016/j.ocemod.2025.102642
  10. Ye, F., Zhang, Y., Yu, H., Cassalho, F., Zyserman, J., Mani, S., Moghimi, S., Yoo, H., Seroka, G., Yang, Z., and Myers, E.P. (2026) Improving Compound Flood Modeling Skill in Coastal Transition Zones, Ocean Modelling, 199, 102643. https://doi.org/10.1016/j.ocemod.2025.102643
  11. Wu, W., Wang, Z., Zhang, Y., Shen, J., Tian, R., Linker, L.C., Cerco, C.F. (2026) Improving cross-scale hydrodynamic simulations in the Chesapeake Bay with physically based calibration, Ocean Modelling, 200, 102680. https://doi.org/10.1016/j.ocemod.2026.102680.
  1. Li, R., Li, S., Wu, W., Dong, X., and Babanin, A.V. (2026) The impact of vegetation on hydrodynamics in Port Phillip Bay, Ocean Engineering, 349, 124173, https://doi.org/10.1016/j.oceaneng.2026.124173
  2. Porz, L., Chen, J., Yilmaz, R., Kuhlmann, J., Zhang, W., & Schrum, C. (2026). Dredging and dumping impact coastal fluxes of sediment and organic carbon. Nature Communications, 17(1), 216. https://doi.org/10.1038/s41467-025-68105-5
  3. Du, J., Park, K., Wright, K., Hu, X., Kiaghadi, A., Schoenbaechler, C., and Hua, J. (2026) Quantifying the Flushing Time of Major Coastal Bays in the Northern Gulf of Mexico from 20-Year Simulations. Estuaries and Coasts 49, 34. https://doi.org/10.1007/s12237-025-01648-4
  4. Li, R., Tran, H., McCarroll, J., Babanin, J.V. (2026) Assessing the effects of sea level rise on ocean waves and surge events along the Victorian coast, Ocean Modelling, 199, 102653, https://doi.org/10.1016/j.ocemod.2025.102653
  5. Wang, Z., Zhang, Y.J., Shen, J., Testa, J.M., Cerco, C.F., Linker, L., Tian, R. and Wu, W. (2026) Importance of Estuary–Ocean Exchange on Hypoxia in Mid-Lower Chesapeake Bay. Estuaries and Coasts 49, 19. https://doi.org/10.1007/s12237-025-01622-0
  6. Dyer, N., Mani, S., Moghimi, S., De Florianib,L., and Zhang, Y. (2025) Bathymetric Mesh Simplification for Efficient Two-Dimensional Barotropic Tide Modelling in New York Harbor, Ocean Dynamics, 75, 99. https://doi.org/10.1007/s10236-025-01740-0
  7. Abrao Teixeira, J., Mazzini, P., Cai, X., Colombo, M., Qin, Q., Seeley, M., and Zhang, Y. (2025) Distribution and Fate of Microplastics from the Chesapeake Bay to the Mid-Atlantic Bight: A Lagrangian Particle Tracking Approach, Continental Shelf Research, 105627, https://doi.org/10.1016/j.csr.2025.105627
  8. Chen, J., Zhang, W., Porz, L., Arlinghaus, P., Hanz, U., Holtappels, M., & Schrum, C. (2025). Physical Mechanisms of Sediment Trapping and Deposition on Spatially Confined Mud Depocenters in High-Energy Shelf Seas. Journal of Geophysical Research: Oceans, 130(7), e2025JC022622. https://doi.org/10.1029/2025JC022622
  9. Christiansen, N., Daewel, U., Krings, L., & Schrum, C. (2025). Offshore hydrogen production leaves a local hydrographic footprint on stratification in the North Sea. NPJ Ocean Sustainability, 4(1), 19. https://doi.org/10.1038/s44183-025-00121-w
  10. Demir, K. T., Mathis, M., Kossack, J., Liu, F., Daewel, U., & Stegert, C., et al. (2025). Variable organic matter stoichiometry enhances the biological drawdown of CO2 in the northwest European shelf seas. Biogeosciences, 22(11), 2569–2599. https://doi.org/10.5194/bg-22-2569-2025
  11. Liu, F., Daewel, U., Kossack, J., Demir, K. T., Thomas, H., & Schrum, C. (2025). Evaluating ocean alkalinity enhancement as a carbon dioxide removal strategy in the North Sea. Biogeosciences, 22(14), 3699–3719. https://doi.org/10.5194/bg-22-3699-2025
  12. Mohr, V., Zhang, W., Dolch, T., & Schrum, C. (2025). The Importance of Seasonality in Seagrass Properties for Coastal Hydro-Morphodynamics - A Case Study in a Wadden Sea Basin. Journal of Geophysical Research: Earth Surface, 130(11), e2025JF008331. https://doi.org/10.1029/2025JF008331
  13. Tiwari, P., Porz, L., Daewel, U., Kossack, J., Liu, F., & Demir, K. T., et al. (2025). Evaluating bottom trawling effects on North Sea productivity. ICES Journal of Marine Science, 82(9), fsaf149. https://doi.org/10.1093/icesjms/fsaf14
  14. Hosseini, S.T., Stanev, E., Pein, J., Schrum, C. and Jacob, B. (2025) Tidal impacts on volume and salt transport through the Strait of Hormuz and on Persian Gulf salinity. Ocean Dynamics 75, 88. https://doi.org/10.1007/s10236-025-01735-x
  15. Cai, X., Qin, Q., Cui, L., Yang, X., Zhang, Y. J., and Shen, J. (2025) NAAC (v1.0): a seamless two-decade cross-scale simulation from the North American Atlantic Coast to tidal wetlands using the 3D unstructured-grid model SCHISM (v5.11.0), Geosci. Model Dev., 18, 7435–7449, https://doi.org/10.5194/gmd-18-7435-2025
  16. Huang, W., Li, C., Valle-Levinson, A., Gann, D. Sukop, M., Obeysekera, J., and Troxler, T. (2025) Wind-driven exchange flow and inter-basin connectivity in a multiple-inlet bay, Ocean Modelling, https://doi.org/10.1016/j.ocemod.2025.102624
  17. Khazaei, B., Moghimi, S., Mani, S., Myers, E., Zhang, Y., and Liu, Y. (2025) Sensitivity Analysis of a Coastal Ocean Forecast Model to Nearshore Bathymetric Variability, ASCE's Journal of Hydrologic Engineering, 2026, 31(1): 04025047.
  18. Calzada, J., Zhang, Y., Ye, F., and Cui, L. (2025) Development of a data-driven automatic unstructured mesh generation tool suitable for compound flooding studies, Environmental Modelling & Software, 192, 106587. https://doi.org/10.1016/j.envsoft.2025.106587
  19. Coulet, P., Durand, F., Fassoni-Andrade, A., Khan, J. U., Testut, L., Toublanc, F., Guedes Santos, L. Medeiros Moreira, D., Azevedo, A. (2025) Dynamics of Yearly Maximum Water Levels in the Amazon Estuary, Estuaries and Coasts, 48: 54. 10.1007/s12237-025-01483-7
  20. Kossack, J., Mathis, M., Daewel, U., Liu, F., Demir, K. T., Thomas, H., & Schrum, C. (2024). Tidal impacts on air-sea CO2 exchange on the North-West European shelf. Frontiers in Marine Science, 11. https://doi.org/10.3389/fmars.2024.1406896
  21. Tran, H., Ayala, C., McCarroll, J., Babanin, A. (2024) Non-linear surges and extreme wind-waves in Port Phillip Bay under existing and future mean sea levels, Frontiers in Marine Science, 11, 10.3389/fmars.2024.1480054
  22. Wang, Q., Zhang, Y., Chai, F., Zhang, Y. J., and Zampieri, L. (2024) Development of a total variation diminishing (TVD) sea ice transport scheme and its application in an ocean (SCHISM v5.11) and sea ice (Icepack v1.3.4) coupled model on unstructured grids, Geosci. Model Dev., 17, 7067–7081, https://doi.org/10.5194/gmd-17-7067-2024
  23. Zhang, H., Shen, D., Bao, S., and Pietrafesa, L. (2024) "Two-Way Coupling of the National Water Model (NWM) and Semi-Implicit Cross-Scale Hydroscience Integrated System Model (SCHISM) for Enhanced Coastal Discharge Predictions" Hydrology 11, no. 9: 145. https://doi.org/10.3390/hydrology11090145
  24. Yu, H.C., Zhang, Y.J., Jan, S., Yu, J.C.S., Chu, C.H., Terng, C.T., and Chiu, C.M. (2024) Internal tides reverse tidal currents around Southern Taiwan. Journal of Geophysical Research: Oceans, 129, e2024JC020897. https://doi.org/10.1029/2024JC020897
  25. Porz, L., Zhang, W., Christiansen, N., Kossack, J., Daewel, U., and Schrum, C. (2024) Quantification and mitigation of bottom-trawling impacts on sedimentary organic carbon stocks in the North Sea, Biogeosciences, 21, 2547–2570, https://doi.org/10.5194/bg-21-2547-2024, 2024.
  26. Arlinghaus, P., Schrum, C., Kroncke, I., & Zhang, W. (2024) Benthos as a key driver of morphological change in coastal regions. Earth Surf. Dynam., 12, 537–558, doi:10.5194/esurf-12-537-2024
  27. Ma, M., Porz, L., Schrum, C., & Zhang, W. (2024) Physical mechanisms, dynamics and interconnections of multiple estuarine turbidity maximum in the Pearl River estuary. Front. Mar. Sci., 11:1385382, doi:10.3389/fmars.2024.1385382
  28. Ma, M., Zhang, W., Chen, W., Deng, J., & Schrum, C. (2023) Impacts of morphological change and sea-level rise on stratification in the Pearl River Estuary. Front. Mar. Sci., 10:1072080, doi:10.3389/fmars.2023.1072080
  29. Porz, L., Zhang, W., & Schrum, C. (2023) Natural and anthropogenic influences on the development of mud depocenters in the southwestern Baltic Sea. Oceanologia, Vol. 65, 1, 182 - 193, doi:10.1016/j.oceano.2022.03.005
  30. Arlinghaus, P., Zhang, W., & Schrum, C. (2022) Small-scale benthic faunal activities may lead to large-scale morphological change - A model based assessment. Front. Mar. Sci., 9:1011760, doi:10.3389/fmars.2022.1011760
  31. Bennier et al. (2024) Storm Surges and Extreme Sea Levels: Review, Establishment of Model Intercomparison and Coordination of Surge Climate Projection Efforts (SurgeMIP), Weather & Climate Extremes, https://doi.org/10.1016/j.wace.2024.100689
  32. Shen, J., Wang, Z., Du, J., Zhang, Y. J., & Qin, Q. (2024). Machine learning-based wave model with high spatial resolution in Chesapeake Bay. Earth and Space Science, 11, e2023EA003303. https://doi.org/10.1029/2023EA003303
  33. Hosseini, S. T., Siadatmousavi, S. M., Stanev, E., Pein, J., & Schrum, C. (2024). Transitions Between Different Estuarine States in a Low-inflow Estuary of Arid Coasts (Mond Estuary, Persian Gulf) with a Focus on Freshwater Lenses. Regional Studies in Marine Science 74 (2024) 103525, https://doi.org/10.1016/j.rsma.2024.103525
  34. Pein, J., Staneva, J. Eutrophication hotspots, nitrogen fluxes and climate impacts in estuarine ecosystems: A model study of the Odra estuary system. Ocean Dynamics 74, 335–354 (2024). https://doi.org/10.1007/s10236-024-01607-w
  35. Samou Seujip, M., Bertin, X., Sakho, I., and Diouf, M. (2024) Impact of mangrove on tidal propagation in a tropical coastal lagoon. Environ Earth Sci 83, 52 (2024). https://doi.org/10.1007/s12665-023-11349-5
  36. Huang, W., Li, C. & Rivera-Monroy, V.H. (2024) Cold fronts control multiscale spatiotemporal hydroperiod patterns in a man-made subtropical coastal delta (Wax Lake Region, Louisiana USA). Ocean Dynamics. https://doi.org/10.1007/s10236-024-01608-9
  37. Park, K., Di Lorenzo, E., Zhang, Y., Wang, H.V., Ezer, T., and Ye, F. (2024) Delayed coastal inundations caused by ocean dynamics post-Hurricane Matthew. npj Clim Atmos Sci 7, 5. https://doi.org/10.1038/s41612-023-00549-2
  38. Cai, X., Shen, J., Zhang, Y., Qin, Q., and Linker, L. (2023). Sea-level rise impacts on tidal marshes and estuarine biogeochemical processes. Journal of Geophysical Research: Biogeosciences, 128, e2023JG007450. https://doi.org/10.1029/2023JG007450
  39. Tian, R., Cai, X., Cerco, C.F., Zhang, Y., and Linker, L.C. (2024) Simulation of benthic microalgae impacts on water quality in shallow water systems, Corsica River, Chesapeake Bay. Front. Mar. Sci. 10:1295986. doi: 10.3389/fmars.2023.1295986
  40. Huang, W., Ye, F., Zhang, Y., Du, J., Park, K., Yu, H.C., Wang, Z. (2023) Hydrodynamic responses of estuarine bays along the Texas-Louisiana coast during Hurricane Harvey, Ocean Modelling, 102302, https://doi.org/10.1016/j.ocemod.2023.102302
  41. Jacob, B., Dolch, T., Wurpts, A. and Staneva, J. (2023) Evaluation of seagrass as a nature-based solution for coastal protection in the German Wadden Sea. Ocean Dynamics. https://doi.org/10.1007/s10236-023-01577-5
  42. Wu, W., Zhai, F., Liu, C., Gu, Y., and Li, P. (2023) Three-dimensional structure of summer circulation in the Bohai Sea and its intraseasonal variability. Ocean Dynamics 73, 679–698. https://doi.org/10.1007/s10236-023-01576-6
  43. Kossack, J., Mathis, M., Daewel, U., Zhang, Y. and Schrum, C. (2023) Barotropic and baroclinic tides increase primary production on the Northwest European Shelf Front. Mar. Sci. 10:1206062. doi: 10.3389/fmars.2023.1206062
  44. Nesterov, O., Addad, Y., Bilal, S., Bosc, E., Abida, R., Al Shehhi, M.R., Temimi, M. (2023) A numerical assessment of the dispersion of dissolved pollutants in the Arabian Gulf associated with the Barakah nuclear power plant, Ocean Modelling, Volume 186, 102274, https://doi.org/10.1016/j.ocemod.2023.102274
  45. Mentaschi L, Vousdoukas MI, García-Sánchez G, Fernández-Montblanc T, Roland A, Voukouvalas E, Federico I, Abdolali A, Zhang YJ and Feyen L (2023) A global unstructured, coupled, high-resolution hindcast of waves and storm surge. Front. Mar. Sci. 10:1233679. doi: 10.3389/fmars.2023.1233679
  46. Ye, F., Cui, L., Zhang, Y., Wang, Z., Moghimi, S., Myers, E., Seroka, G., Zundel, A., Mani, S., Kelley, J.G.W. (2023) A parallel Python-based tool for meshing watershed rivers at continental scale, Environmental Modelling & Software, 166, 105731. https://doi.org/10.1016/j.envsoft.2023.105731 (free access for 50 days: https://authors.elsevier.com/c/1hAc-4sKhEZH1K
  47. Zhang, Y. J., Fernandez-Montblanc, T., Pringle, W., Yu, H.-C., Cui, L., and Moghimi, S. (2023) Global seamless tidal simulation using a 3D unstructured-grid model (SCHISM v5.10.0), Geoscientific Model Development, 16, 2565-2581. https://doi.org/10.5194/gmd-16-2565-2023
  48. Hosseini, S.T., Stanev, E.V., Pein, J., Valle-Levinson, A. and Schrum, C. (2023) Longitudinal and Lateral Circulation and Tidal Impacts in Salt-Plug Estuaries, Frontiers in Marine Science, 10. https://doi.org/10.3389/fmars.2023.1152625
  49. Huang, W., Zhang, Y.J, Liu, Z., Yu, H.C., Liu, Y., Lamont, S., Zhang, Y., Hirpa, F., Li, T., Baker, B., Zhang, W., Patel, S., and Mori, N. (2023) Simulation of compound flooding in Japan using a nationwide model, Natural Hazards. https://doi.org/10.1007/s11069-023-05962-7
  50. Zhang, Y., Wu, C.H., Anderson, J., Liu, Y., Danilov, S., Wang, Q., and Wang, Q. (2023) Lake ice simulation using a 3D unstructured grid model. Ocean Dynamics, 73:219–230. https://doi.org/10.1007/s10236-023-01549-9
  51. Fassoni-Andrade, A.C., Durand, F., Azevedo, A., Bertin, X., Guedes Santos, L., Khan, J.U., Testut, L., Moreira, D. (2023) Seasonal to interannual variability of the tide in the Amazon estuary. Continental Shelf Research, 255, 104945, https://doi.org/10.1016/j.csr.2023.104945
  52. Cai, X., Shen, J., Zhang, Y. J., Qin, Q., & Linker, L. (2023). The roles of tidal marshes in the estuarine biochemical processes: A numerical modeling study. Journal of Geophysical Research: Biogeosciences, 128, e2022JG007066. https://doi.org/10.1029/2022JG007066
  53. Xiong, J., Shen, J., Qin, Q., Tomlinson, M.C., Zhang, Y.J., Cai, X., Ye, F., Cui, L. and Mulholland, M.R. (2023), Biophysical interactions control the progression of harmful algal blooms in Chesapeake Bay: A novel Lagrangian particle tracking model with mixotrophic growth and vertical migration. Limnol. Oceanogr. Lett. https://doi.org/10.1002/lol2.10308
  54. Martins, K., Bertin, X., Mengual, B., Pezerat, M., Lavaud, L., Guerin, T., Zhang, Y. (2022) Wave-induced mean currents and setup over barred and steep sandy beaches, Ocean Modelling, 179, 102110, https://doi.org/10.1016/j.ocemod.2022.102110.
  55. Nahon, A., Idier, D., Bertin, X., Guerin, T., Marieu, V., Senechal, N., Mugica, J. (2022) Modelling the contribution of wind waves to Cap Ferret's updrift erosion, Coast. Eng., Vol. 172, 104063. link
  56. Brovchenko, I., Kim, K.O., Maderich, V., Jung, K.T., Bezhenar, R., Ryu, J.H., Min, J.E. (2022) Sediment and radioactivity transport in the Bohai, Yellow, and East China Seas: A modeling study. J. Mar. Sci. Eng., 10, 596.
  57. Brovchenko I., Maderich V, Choi B. H., Kim K.O., Martazinova V. (2022) Modelling of short-term variations of currents, temperature, salinity and sea level in the Strait of Dardanelles. Ocean Engineering 245 110567. link
  58. Toomey T, Amores A, Marcos M and Orfila A (2022) Coastal sea levels and wind-waves in the Mediterranean Sea since 1950 from a high-resolution ocean reanalysis. Front. Mar. Sci. 9:991504. doi: 10.3389/fmars.2022.991504
  59. Tian, R., Cai, X., Testa, J.M., Brady, D.C., Cerco, C.F. and Linker, L.C. (2022) Simulation of high-frequency dissolved oxygen dynamics in a shallow estuary, the Corsica River, Chesapeake Bay. Front. Mar. Sci. 9:1058839. doi: 10.3389/fmars.2022.1058839
  60. Khan, M. J. U., Durand, F., Emanuel, K., Krien, Y., Testut, L., and Islam, A. K. M. S. (2022) Storm surge hazard over Bengal delta: a probabilistic-deterministic modelling approach, Nat. Hazards Earth Syst. Sci., 22, 2359-2379, https://doi.org/10.5194/nhess-22-2359-2022
  61. Amores, A., Monserrat, S., Marcos, M., Argueso, D., Villalonga, J., Jorda, G., and Gomis, D. (2022) Numerical simulation of atmospheric Lamb waves generated by the 2022 Hunga-Tonga volcanic eruption. Geophysical Research Letters, 49, e2022GL098240. https://doi.org/10.1029/2022GL098240
  62. Wang, H., Gong, D., Friedrichs, M., Harris, C., Miles, T., Yu, H.-C. and Zhang, Y. (2022) A Cycle of Wind-Driven Canyon Upwelling and Downwelling at Wilmington Canyon and the Evolution of Canyon-Upwelled Dense Water on the Shelf. Front. Mar. Sci. 9:866075. doi: 10.3389/fmars.2022.866075
  63. Toomey, T., Amores, A., Marcos, M., Orfila, A., and Romero, R. (2022) Coastal hazards of tropical-like cyclones over the Mediterranean Sea. Journal of Geophysical Research: Oceans, 127, e2021JC017964. https://doi.org/10.1029/2021JC017964
  64. Cai, X., Qin, Q., Shen, J. and Zhang, Y.J. (2022), Bifurcate responses of tidal range to sea-level rise in estuaries with marsh evolution. Limnol. Oceanogr. Lett, 7: 210-217. https://doi.org/10.1002/lol2.10256
  65. Huang, W., Zhang, Y., Wang, Z., Ye, F., Moghimi, S., Myers, E., Yu, H. (2022) Tidal simulation revisited, Ocean Dynamics, 72:187-205. https://doi.org/10.1007/s10236-022-01498-9
  66. Wang, Z., Li, D., Xue, H., Thomas, A. C., Zhang, Y. J., & Chai, F. (2022). Freshwater transport in the Scotian Shelf and its impacts on the Gulf of Maine salinity. Journal of Geophysical Research: Oceans, 127, e2021JC017663. https://doi.org/10.1029/2021JC017663
  67. Li, D., Wang, Z., Xue, H., Thomas, A. C., Pettigrew, N., and Yund, P. O. (2021). Seasonal variations and driving factors of the Eastern Maine Coastal Current. Journal of Geophysical Research: Oceans, 126, e2021JC017665. https://doi.org/10.1029/2021JC017665
  68. Roger, J., Pelletier, B., Duphil, M., Lefevre, J., Aucan, J., Lebellegard, P., Thomas, B., Bachelier, C., and Varillon, D. (2021) The Mw 7.5 Tadine (Mare, Loyalty Islands) earthquake and related tsunami of 5 December 2018: seismotectonic context and numerical modeling, Nat. Hazards Earth Syst. Sci., 21, 3489-3508, https://doi.org/10.5194/nhess-21-3489-2021
  69. Moghimi, S., Myers, E., Pe'eri, S., Zhang, Y.J., and Ye, F. (2021), Forecasting compound floods in complex coastal regions, Eos, 102, (https://doi.org/10.1029/2021EO210604) Published on 16 November 2021.
  70. Nunez, K. Zhang, Y., Bilkovic, D.M., Hershner, C. (2021) Coastal Setting Determines Tidal Marsh Sustainability with Accelerating Sea-level Rise. Ocean and Coastal Management, 214, 105898.
  71. Yoo, H. J., Jeong, S., Kim, D. H., & Lee, S. O. (2021). Hydraulic and ecological changes under drainage gate operations with coupled model SCHISM-CoSiNE in Saemangeum basin, Korea. Journal of Environmental Engineering and Landscape Management, 29(3), 346-358. https://doi.org/10.3846/jeelm.2021.15130
  72. Hyung Ju Yoo, Dong Hyun Kim, Moon Hyung Park, and Seung Oh Lee (2021) "Economic Sediment Transport Control with Sediment Flushing Curves for Sea Dike Gate Operation: Case Study in Saemangeum Basin, Korea," Journal of Coastal Research 114(sp1), 161-165. https://doi.org/10.2112/JCR-SI114-033.1
  73. Hood, R.R., Shenk, G.W., Dixon, R.L., Smith, S., Ball, W.P., Bash, J.O., Batiuk, R., Boomer, K., Brady, D.C., Cerco, C., Claggett, P., de Mutsert, K., Easton, Z.M., Elmore, A.J., Friedrichs, M., Harris, L.A., Ihde, T.F., Lacher, L., Li, L., Linker, L.C., Miller, A., Moriarty, J., Noe, G.B., Onyullo, G.E., Rose, K., Skalak, K., Tian, R., Veith, T.L., Wainger, L., Weller, D., and Zhang, Y. (2021) Chesapeake Bay Program Modeling System: Overview and Recommendations for Future Development. Ecological Modelling, 456, 109635. [Review paper on EPA Chesapeake Bay Program's modeling effort and future vision]
  74. Khan, J., Durand, F., Bertin, X., Testut, L., Krien, Y., Islam, A., Pezerat, M., and Hossain, S. (2021) Towards an efficient storm surge and inundation forecasting system over the Bengal delta: Chasing the super-cyclone Amphan, Nat. Hazards Earth Syst. Sci. https://doi.org/10.5194/nhess-21-2523-2021
  75. Freire, P., M. Rodrigues, A.B. Fortunato, A. Freitas 2021. Flood and drought risk assessment for agricultural areas (Tagus Estuary, Portugal), Natural Hazards and Earth System Sciences, 21: 2503–2521. DOI: 10.5194/nhess-21-2503-2021
  76. Tavares, A.O., J.L. Barros, P. Freire, P.P. Santos, L. Perdiz, A.B. Fortunato 2021. A coastal flooding database from 1980 to 2018 for the continental Portuguese coastal zone, Applied Geography, 135: 102534. DOI: 10.1016/j.apgeog.2021.102534
  77. Fortunato, A.B., P. Freire, B. Mengual, X. Bertin, C. Pinto, K. Martins, T. Guérin, A. Azevedo 2021.Sediment dynamics and morphological evolution in the Tagus Estuary inlet, Marine Geology, 440: 106590. DOI: 10.1016/j.margeo.2021.106590
  78. Rodrigues, M., R. Martins, J. Rogeiro, A. B. Fortunato, A. Oliveira, A. Cravo, J. Jacob, A. Rosa, A. Azevedo, P. Freire 2021. A Web-Based Observatory for Biogeochemical Assessment in Coastal Regions, Journal of Environmental Informatics, 38/1: 1.15. DOI:10.3808/jei.202100450
  79. Rocha, M; Oliveira, A.; Freire, P.; Fortunato, A.B.; Nahon, A.; Barros, J.L.; Azevedo, A.; Oliveira, F.S.B.F.; Rogeiro, J.; Jesus, G.; Martins, R.J.; Santos, P.P.; Tavares, A.O.; Oliveira, J. 2021. Multi-Hazard WebGIS Platform for Coastal Regions, APPLIED SCIENCES-BASEL, 11/11: 5253, DOI: 10.3390/app11115253
  80. Rodrigues, M., A. Rosa, A. Cravo, J. Jacob, A.B. Fortunato (2021). Effects of climate change and anthropogenic pressures in the water quality of a coastal lagoon (Ria Formosa, Portugal), Science of The Total Environment, 780: 146311.
  81. Tran, H.Q., Provis, D., and Babanin, A.V. (2021) Hydrodynamic Climate of Port Phillip Bay. J. Mar. Sci. Eng. 9, 898. https://doi.org/ 10.3390/jmse9080898
  82. Oliveira, A., Fortunato, A.B., Rodrigues, M., Azevedo, A., Rogeiro, J., Bernardo, S., Lavaud, L., Bertin, X., Nahon, A., deJesus, G., Rocha, M., Lopes, P. (2021) Forecasting contrasting coastal and estuarine hydrodynamics with OPENCoastS, Environmental Modelling & Software, 143, 105132. https://doi.org/10.1016/j.envsoft.2021.105132
  83. Pein, J., Eisele, A., Sanders, T., Daewel, U., Stanev, R.V., van Beusekom J.E.E., Staneva, J., and Schrum, C. (2021) Seasonal Stratification and Biogeochemical Turnover in the Freshwater Reach of a Partially Mixed Dredged Estuary, Frontiers in Marine Science, 8, 624. https://www.frontiersin.org/article/10.3389/fmars.2021.623714
  84. Porz, L., Zhang, W., Schrum, C. (2021): Density-driven bottom currents control development of muddy basins in the southwestern Baltic Sea. Marine Geology 438. link
  85. Wang, H., Gong, D., Friedrichs, M.A.M., Harris, C.K., Miles, T., Yu, H.-C. and Zhang, Y. (2022) A Cycle of Wind-Driven Canyon Upwelling and Downwelling at Wilmington Canyon and the Evolution of Canyon-Upwelled Dense Water on the MAB Shelf. Frontier In Marine Science 9:866075. doi: 10.3389/fmars.2022.866075
  86. Wang Z, Chai F, Xue H, Wang XH, Zhang YJ, Dugdale R and Wilkerson F (2021) Light Regulation of Phytoplankton Growth in San Francisco Bay Studied Using a 3D Sediment Transport Model. Frontiers in Marine Science, 8:633707. doi: 10.3389/fmars.2021.633707
  87. Ye, F., Huang, W., Zhang, Y.J., Moghimi, S., Myers, E., Pe'eri, S., and Yu, H.-C. (2021) A cross-scale study for compound flooding processes during Hurricane Florence, 21, 1703-1719, Natural Hazards and Earth System Sciences, https://nhess.copernicus.org/articles/21/1703/2021
  88. Cai, X., J. Shen, Y.J. Zhang, Q. Qin, Z. Wang, and H.V Wang. (2021) Impacts of Sea-Level Rise on Hypoxia and Phytoplankton Production in Chesapeake Bay: Model Prediction and Assessment. Journal of the American Water Resources Association 118. https://doi.org/10.1111/1752-1688.12921
  89. Vennell, R., Scheel, M., Weppe, S., Knight, B. and Smeaton, M. (2021) Fast lagrangian particle tracking in unstructured ocean model grids. Ocean Dynamics 71, 423-437. https://doi.org/10.1007/s10236-020-01436-7
  90. Zhang, B., Wu, B., Zhang, R., Ren, S., Li, M. (2021) 3D numerical modelling of asynchronous propagation characteristics of flood and sediment peaks in three gorges reservoir, Journal of Hydrology, 593, 125896. https://doi.org/10.1016/j.jhydrol.2020.125896
  91. Huang, W., Ye, F., Zhang, Y., Park, K., Du, J., Moghimi, S., Myers, E., Pe'eri, S., Calzada, J.R., Yu, H.C., Nunez, K., and Liu, Z. (2021) Compounding factors for extreme flooding around Galveston Bay during Hurricane Harvey, Ocean Modelling, 158, 101735. link https://doi.org/10.1016/j.ocemod.2020.101735
  92. Zhang, Y. (2021) Assessment of subgrid method in a finite-volume model, Computers and Mathematics with Applications, 81, 220-236. https://doi.org/10.1016/j.camwa.2020.05.002
  93. Lavaud, L., Bertin, X., Martins, K., Arnaud, G., Bouin, M. (2020) The contribution of short-wave breaking to storm surges: The case Klaus in the Southern Bay of Biscay, Ocean Modelling, 156. https://doi.org/10.1016/j.ocemod.2020.101710
  94. Khan, J., Durand, F., Testut, L., Krien, Y., Islam, A.K.M. (2020) Sea level rise inducing tidal modulation along the coasts of Bengal delta, Continental Shelf Research, 211, https://doi.org/10.1016/j.csr.2020.104289
  95. Cai, X., Zhang, Y., Shen, J., Wang, H.V., Wang, Z., Qin, Q., and Ye, F. (2020) A Numerical Study of Hypoxia in Chesapeake Bay Using an Unstructured Grid Model: Validation and Sensitivity to Bathymetry Representation. Journal of the American Water Resources Association, 1-24. https://doi.org/10.1111/1752-1688.12887
  96. Oliveira, A., Fortunato, A.B., Rogeiro, J., Teixeira, J., Azevedo, A., Lavaud, L., Bertin, X., Gomes, J., David, M., Pina, J., Rodrigues, M., and Lopes, P. (2020) OPENCoastS: An open-access service for the automatic generation of coastal forecast systems. Environmental Modelling & Software 124 : 104585. http://dx.doi.org/10.1016/j.envsoft.2019.104585
  97. Haid, V., Stanev, E.V., Pein, J., Staneva, J., and Chen, W. (2020) Secondary circulation in shallow ocean straits: Observations and numerical modeling of the Danish Straits, Ocean Modelling, 148, 101585, https://doi.org/10.1016/j.ocemod.2020.101585
  98. Wang, Z., Chai, F., Dugdale, R., Liu, Q., Xue, H., Wilkerson, F., Chao, Y., Zhang, Y., and Zhang, H. (2020) The interannual variabilities of chlorophyll and nutrients in San Francisco Bay: A modeling study, Ocean Dynamics, 70: 1169-1186. https://doi.org/10.1007/s10236-020-01386-0
  99. Amores, A., Marcos, M., Carrió, D. S., and Gómez-Pujol, L. (2020) Coastal impacts of Storm Gloria (January 2020) over the north-western Mediterranean, Nat. Hazards Earth Syst. Sci., 20, 1955–1968. https://doi.org/10.5194/nhess-20-1955-2020
  100. Nunez, K., Zhang, Y., Herman, J., Reay, W. and Hershner, C. (2020) A multi-scale approach for simulating tidal marsh evolution, Ocean Dynamics, https://doi.org/10.1007/s10236-020-01380-6 link
  101. Zhang, Y., Ye, F., Yu, H., Sun, W., Moghimi, S., Myers, E.P., Nunez, K., Zhang, R., Wang, H.V., Roland, A., Du, J., and Liu, Z. (2020) Simulating compound flooding events in a hurricane, Ocean Dynamics, (https://doi.org/10.1007/s10236-020-01351-x). link
  102. Fernandez-Montblanc, T., Vousdoukas, M.I., Mentaschi, L., and Ciavola, P. (2020) A Pan-European high resolution storm surge hindcast, Environment International, 135, 105367. https://doi.org/10.1016/j.envint.2019.105367
  103. Liu, Z., Wang, H.V., Zhang, Y., Magnusson, L., Loftis, J.D., and Forrest, D. (2020) Cross-scale modeling of storm surge, tide, and inundation in Mid-Atlantic Bight and New York City during Hurricane Sandy, 2012, Estuarine, Coastal and Shelf Science, 233. https://doi.org/10.1016/j.ecss.2019.106544 link
  104. Du, J., Park, K., Yu, X., Zhang, Y., Ye, F. (2020) Massive pollutants released to Galveston Bay during Hurricane Harvey: Understanding their retention and pathway using Lagrangian numerical simulations, Science of The Total Environment, 704. https://doi.org/10.1016/j.scitotenv.2019.135364
  105. Ye, F., Zhang, Y., Yu, H., Sun, W., Moghimi, S., Myers, E.P., Nunez, K., Zhang, R., Wang, H.V., Roland, A., Martins, K., Bertin, X., Du, J., and Liu, Z. (2020) Simulating storm surge and compound flooding events with a creek-to-ocean model: importance of baroclinic effects, Ocean Modelling, 145. https://doi.org/10.1016/j.ocemod.2019.101526 link
  106. Zhang, R. and Wu, B. (2020) Environmental Impacts of High Water Turbidity of the Niulan River to Dianchi Lake Water Diversion Project, Journal of Environmental Engineering, 146(1). https://doi.org/10.1061/(ASCE)EE.1943-7870.0001623
  107. Zhang, Y., Gerdts, N., Ateljevich, E., and Nam, K. (2019) Simulating vegetation effects on flows in 3D using an unstructured grid model: model development and validation, Ocean Dynamics, https://doi.org/10.1007/s10236-019-01333-8 link pdf
  108. Rodrigues, M., Fortunato, A.B., and Freire, P. (2019) Saltwater Intrusion in the Upper Tagus Estuary during Droughts.
  109. Yang, J., Li, L., Zhao, K., Wang, P., Wang, D., Sou, I. M., et al. (2019). A comparative study of Typhoon Hato (2017) and Typhoon Mangkhut (2018) —Their impacts on coastal inundation in Macau. Journal of Geophysical Research: Oceans, 124. https://doi.org/10.1029/2019JC015249 Geosciences 9 9: 400-415. http://dx.doi.org/10.3390/geosciences9090400
  110. Khan, M. J. U., Ansary, M. N., Durand, F., Testut, L., Ishaque, M., Calmant, S., Krien, Y., Islam, A. S. & Papa, F. (2019) High-Resolution Intertidal Topography from Sentinel-2 Multi-Spectral Imagery: Synergy between Remote Sensing and Numerical Modeling, Remote Sensing, 11, 2888, doi:10.3390/rs11242888
  111. Fringer, O.B., Dawson, C.N., He, R., Ralston, D.K., and Zhang, Y. (2019) The future of coastal and estuarine modeling: Findings from a workshop, Ocean Modelling, 143, 101458. https://doi.org/10.1016/j.ocemod.2019.101458 [This is a review paper on current state of coastal modeling]
  112. Ye, F., Zhang, Y., He, R., Wang, Z., Wang, H.V., and Du, J. (2019) Third-order WENO transport scheme for simulating the baroclinic eddying ocean on an unstructured grid, Ocean Modelling, 143, 101466. https://doi.org/10.1016/j.ocemod.2019.101466
  113. Huang, H., Zhang, H., Zhong, D., Zhang, Y. (2019) Turbulent mechanisms in open channel sediment-laden flows, International Journal of Sediment Research, 34(6), 550-563, https://doi.org/10.1016/j.ijsrc.2019.06.002
  114. Durand, F., Piecuch, C.G., Becker, M., Papa, F., Raju, S.V., Khan, J.U., and Ponte, Rui M. (2019) Impact of Continental Freshwater Runoff on Coastal Sea Level, Surveys in Geophysics. https://doi.org/10.1007/s10712-019-09536-w
  115. Stanev, E.V., Jacob, B. and Pein, J. (2019) German Bight estuaries: An inter-comparison on the basis of numerical modeling, Continental Shelf Research, 174, 48-65. https://doi.org/10.1016/j.csr.2019.01.001
  116. Du, J., Park, K., Shen, J., Zhang, Y. J., Yu, X., Ye, F., Wang, Z., and Rabalais, N. N. (2019) A hydrodynamic model for Galveston Bay and the shelf in the northern Gulf of Mexico, Ocean Sci., 15, 951-966, https://doi.org/10.5194/os-15-951-2019
  117. Linares, A., Wu, C.H., Bechle, A.J., Anderson, E.J., Kristovich, D.A. (2019) Unexpected rip currents induced by a meteotsunami, Nature- Scientific Reports, https://doi.org/10.1038/s41598-019-38716-2
  118. T. Fernandez-Montblanc, M.I. Vousdoukas, P. Ciavola, E. Voukouvalas, L Mentaschi, G. Breyiannis, L. Feyen, P. Salamon, (2019) Towards robust pan-European storm surge forecasting, Ocean Modelling, 133, 129-144, https://doi.org/10.1016/j.ocemod.2018.12.001.
  119. Wang, Z., Ye, F., Chai, F., Wang, H.V., Du, J., Shen, J., Zhang, Y., Liu, Z. (2019) An analytical phytoplankton model and its application in the tidal freshwater James River, Estuarine, Coastal and Shelf Science, 224, 228-244.
  120. Li, J., Yang, W., Li, W., Mu, L., and Jin, Z. (2018) Coupled hydrodynamic and water quality simulation of algal bloom in the Three Gorges Reservoir, China, Ecological Engineering, 119, 97-108, https://doi.org/10.1016/j.ecoleng.2018.05.018.
  121. Pein, J., Valle-Levinson, A., &Stanev, E. V. (2018). Secondary circulation asymmetry in ameandering, partially stratified estuary. Journal of Geophysical Research:Oceans,123, 1670–1683. https://doi.org/10.1002/2016JC012623
  122. Fortunato, A.B., Meredith, E.P., Rodrigues, M., Freire, P., Feldmann, H. (2018) Near-future changes in storm surges along the Atlantic Iberian coast, Natural Hazards. https://doi.org/10.1007/s11069-018-3375-z
  123. Chiu, C., Huang, C., Wu, L., Zhang, Y., Chuang, L., Fan, Y., Yu, H-C. (2018) Forecasting of oil-spill trajectories by using SCHISM and X-band radar, Marine Pollution Bulletin, 137, 566-581.
  124. Stanev, E.V., Pein, J., Grashorn, S., Zhang, Y., and Schrum, C. (2018) Dynamics of the Baltic Sea Straits via Numerical Simulation of Exchange Flows, Ocean Modelling, 131, 40-58.
  125. Bubalo, M, Janekovic, I, and Orlic, M (2018) Chrystal and Proudman resonances simulated with three numerical models. Ocean Dynamics 68, 497-507. doi: 10.1007/s10236-018-1146-8
  126. Medugorac I, Orlic M, Janekovic I, Pasaric M, Pasaric Z (2018) Adriatic storm surges and related cross-basin sea-level slope. Journal of Marine Systems 181, 79-90. doi: 10.1016/j.jmarsys.2018.02.005.
  127. Liu, Q., Anderson, E., Zhang, Y., Weinke, A.D., Knapp, K.L., Biddanda, B.A. (2018) Modeling Reveals the Role of Coastal Upwelling and Hydrologic Inputs on Biologically Distinct Water Exchanges in a Great Lakes Estuary. Estuarine, Coastal and Shelf Science, 209, 41, https://doi.org/10.1016/j.ecss.2018.05.014.
  128. Allan, J., Priest, G.R., Zhang, Y.J. and Gabel, L. (2018) Maritime Tsunami Evacuation Guidelines for the Pacific Northwest Coast of Oregon, Natural Hazards. DOI 10.1007/s11069-018-3372-2
  129. Rogeiro, J; Rodrigues, M; Azevedo, A; Oliveira, A; Martins, JP; David, M; Pina, J; Dias, N; Gomes, J (2018). Running high resolution coastal models in forecast systems: Moving from workstations and HPC cluster to cloud resources, Advances in Engineering Software, 117: 70-79, DOI: 10.1016/j.advengsoft.2017.04.002
  130. Oliveira, A; Fortunato, AB; Freire, P; Rogeiro, J; Azevedo, A; Rodrigues, M; David, LM; Alves, E; Mendes, A; Teixeira, J. 2018. Plataforma interativa e integradora para gestão do risco de inundação costeira, Revista Recursos Hídricos 39, 1: 31 - 42. doi: 10.5894/rh39n1-cti2 (in Portuguese)
  131. Rodrigues, M; Fortunato, AB 2017. Assessment of a three-dimensional baroclinic circulation model of the Tagus estuary (Portugal), AIMS Environmental Science 4, 6: 763 - 787. doi: 10.3934/environsci.2017.6.763
  132. Liu, Q., Chai, F., Dugdale, R., Chao, Y., Xue, H., Rao, S., Wilkerson, F., Farrara, J., Zhang, H., Wang, Z., Zhang, Y. (2018) San Francisco Bay nutrients and plankton dynamics as simulated by a coupled hydrodynamic-ecosystem model, Continental Shelf Research, 161, 29-48. https://doi.org/10.1016/j.csr.2018.03.008.
  133. Ye, F., Zhang, Y., Wang, H., Friedrichs, M.A.M., Irby, I.D., Alteljevich, E., Valle-Levinson, A., Wang,Z., Huang, H., Shen, J., Du, J. (2018) A 3D unstructured-grid model for Chesapeake Bay: importance of bathymetry, Ocean Modelling, 127, 16-39. pdf
  134. Li, X., Zhong, D., Zhang, Y., Wang, Y., Wang, Y., and Zhang, H. (2018) Wide river or narrow river: Future river training strategy for Lower Yellow River under global change, International Journal of Sediment Research, https://doi.org/10.1016/j.ijsrc.2018.04.001.
  135. Guerin, T., Bertin, X., Coulombier, T., and de Bakker, A. (2018) Impacts of wave-induced circulation in the surf zone on wave setup, Ocean Modelling, 123, 86-97.
  136. Liu, Z., Zhang, Y., Wang, H.V., Wang, Z., Ye, F., Huang, H., and Sisson, M. (2018) Impact of small-scale structures on estuarine circulation, Ocean Dynamics, 68(4), 509-533, https://doi.org/10.1007/s10236-018-1148-6. pdf
  137. Du, J., Shen, J., Zhang, Y., Ye, F., Liu, Z., Wang, Z., Wang, Y., Yu, X., Sisson, M. and Wang, H. V. (2018). Tidal response to sea-level rise in different types of estuaries: The importance of length, bathymetry, and geometry. Geophysical Research Letters, 45. https://doi.org/10.1002/2017GL075963
  138. Ye, F., Zhang, Y., Wang, H.V., Huang, H., Wang, Z., Liu, Z., and Li, X. (2018) Cross-scale baroclinic simulation on the effect of channel dredging in an estuarine setting, Water, 10, 163. doi:10.3390/w10020163
  139. Chao, Y., Farrara, J.D., Zhang, H., Zhang, Y., Ateljevich, E., Chai, F., Davis, C.O., Dugdale, R., Wilkerson, F. (2017) Development, implementation, and validation of a modeling system for the San Francisco Bay and Estuary, Estuarine, Coastal and Shelf Science, 194, 40-56. https://doi.org/10.1016/j.ecss.2017.06.005.
  140. Yu, H-C., Zhang, Y., Yu, J.C.S., Terng, C., Sun, W., Ye, F., Wang, H.V., Wang, Z., and Huang, H. (2017) Simulating multi-scale oceanic processes around Taiwan on unstructured grids, Ocean Modelling, 112, 72-93. pdf http://dx.doi.org/10.1016/j.ocemod.2017.09.007
  141. Azevedo, A.; Fortunato, A.B; Epifânio, B.; den Boer, S; Oliveira, E.R; Alves, F.L; de Jesus, G; Gomes, J.L; Oliveira, A. 2017. An oil risk management system based on high-resolution hazard and vulnerability calculations, Ocean & Coastal Management 136, 1: 1 - 18.
  142. Fortunato, A.B; Oliveira, A.; Rogeiro, J.; Tavares da Costa, R; Gomes, J. L; Li, K.; de Jesus, G; Freire, P.; Rilo, A.; Mendes, A.; Rodrigues, M.; Azevedo, A. 2017. Operational forecast framework applied to extreme sea levels at regional and local scales, Journal of Operational Oceanography 10, 1: 1 - 15.
  143. Fortunato, A.B; Freire, P.; Bertin, X.; Rodrigues, M.; Ferreira, J.; Liberato, M.L. 2017. A numerical study of the February 15, 1941 storm in the Tagus estuary, Continental Shelf Research 144, -: 50 - 64.
  144. Schloen, J., E. V. Stanev, S. Grashorn (2017) Wave-current interactions in the southern North Sea: The impact on salinity. Ocean Modelling. 111, 19-37.
  145. Jacob, B, and E.V. Stanev (2017) Interaction between wind and tidally induced currents in coastal and shelf seas. Ocean dynamics, 67, 1263-1281. DOI: 10.1007/s10236-017-1093-9
  146. Chao, Y., Farrara, J.D., Bjorkstedt, E., Chai, F., Chavez, F., Rudnick, D., Enright, W., Fisher, J.L., Peterson, W.T., Welch, G.F., Davis, C.O., Dugdale, R.C., Wilkerson, F.P., Zhang, H., Zhang, Y., Ateljevich, E. (2017) The origins of the anomalous warming in the California coastal ocean and San Francisco Bay during 2014-2016 , J. Geophysical Research-Oceans. DOI: 10.1002/2017JC013120
  147. Maderich V., Jung K.T., Brovchenko I., Kim K.O. (2017) Migration of radioactivity in multi-fraction sediments. Environmental Fluid Mechanics, doi: 10.1007/s10652-017-9545-9.
  148. Stanev, E.V., Grashorn, S. & Zhang, Y. (2017) Cascading ocean basins: numerical simulations of the circulation and interbasin exchange in the Azov-Black-Marmara-Mediterranean Seas system, Ocean Dynamics, DOI 10.1007/s10236-017-1071-2.
  149. Lynett, P.J., Gately, K., Wilson, R., Montoya, L., Adams, L., Arcas, D., Aytore, B., Bai, Y., Bricker, J.D., Castro, M.J., Cheung, K., David, C., Dogan, G., Escalante, C., Gonzalez, F.I., Gonzalez-Vida, J., Grilli, S.T., Heitmann, T.W., Horrillo, J., Ka¢noÄŸlu, U., Kian, R., Kirby, J.T., Li, W., Macaas, J., Nicolsky, D.J., Ortega, S., Pampell-Manis, A., Park, Y., Roeber, V., Sharghivand, N., Shelby, M., Shi, F., Tehranir, B., Tolkova, E., Thio, H., Velioglu, D., Yalciner, A., Yamazaki, Y., Zaytsev, A., Zhang, Y. (2017) Inter-Model Analysis of Tsunami-Induced Coastal Currents, Ocean Modelling, 114, 14-32 (http://dx.doi.org/10.1016/j.ocemod.2017.04.003).
  150. Priest, G.R., Witter, R.C., Zhang, Y., Goldfinger, C., and Wang, K. (2017) New constraints on coseismic slip during southern Cascadia subduction zone earthquakes over the past 4600 years implied by tsunami deposits and marine turbidites, Natural Hazards. DOI: 10.1007/s11069-017-2864-9
  151. Y. Krien, L. Testut, A.K.M.S. Islam, X. Bertin, F. Durand, C. Mayet, A.R. Tazkia, M. Becker, S. Calmant, F. Papa, V. Ballu, C.K. Shum, Z.H. Khan (2017) Towards improved storm surge models in the northern Bay of Bengal, Continental Shelf Research, Volume 135, Pages 58-73, ISSN 0278-4343, http://dx.doi.org/10.1016/j.csr.2017.01.014.
  152. Y. Krien, C. Mayet, L. Testut, F. Durand, A. R. Tazkia, A. K. M. S. Islam, V. V. Gopalakrishna, M. Becker, S. Calmant, C. K. Shum, Z. H. Khan, F. Papa & V. Ballu (2016): Improved Bathymetric Dataset and Tidal Model for the Northern Bay of Bengal, Marine Geodesy, DOI: 10.1080/01490419.2016.1227405
  153. Tazkia, A.R., Krien, Y., Durand, F., Testut, L., Islam, A., Papa, F., Bertin, X. (2017) Seasonal modulation of M2 tide in the Northern Bay of Bengal, Continental Shelf Research, 137, 154-162.
  154. Linares, A., Bechle, A.J., and Wu, C.H. ( 2016), Characterization and assessment of the meteotsunami hazard in northern Lake Michigan, J. Geophys. Res. Oceans, 121, 7141– 7158, doi:10.1002/2016JC011979.
  155. Periáñez R., Bezhenar R., Brovchenko I., Cuffa C., Iosjpe M., Jung K.T., Kobayashi T., Lamego F., Maderich V., Min B.I., Nies H., Osvath I., Outola I., Psaltaki M., Suh K.S., de With G. (2016) A comparison of radionuclide dispersion model performances for the Baltic Sea and Fukushima releases in the Pacific Ocean . Radioprotection 51(HS2), S149-S151.
  156. Periañez R., Bezhenar R., Iosjpe M., Brovchenko I.., Duffa C., Jung K.T., Kobayashi T., Lamego F., Maderich V., Min, B.-I., Nies H., Osvath I., Psaltaki M., Suh K., de With G. (2016) Modelling of marine radionuclide dispersion in IAEA MODARIA program: lessons learnt from the Baltic Sea and Fukushima scenarios. Science of the Total Environment, 569–570, 594–602.
  157. Grashorn, S. and Stanev, E.V. (2016) Karman vortex and turbulent wake generation by wind park piles, Ocean Dynamics, 66, 1543-1557. DO I 10.1007/s10236-016-0995-2
  158. Ye, F., Zhang, Y., Friedrichs, M., Wang, H.V., Irby, I., Shen, J., and Z. Wang (2016) A 3D, cross-scale, baroclinic model with implicit vertical transport for the Upper Chesapeake Bay and its tributaries, Ocean Modelling, vol. 107, 82-96. 10.1016/j.ocemod.2016.10.004.
  159. Stanev, E.V., Schulz-Stellenfleth, J., Staneva, J., Grayek, S., Grashorn, S., Behrens, A., Koch, W., and Pein, J. (2016) Ocean forecasting for the German Bight: from regional to coastal scales, Ocean Science, 12, 1105-1136, doi:10.5194/os-12-1105-2016
  160. Pein, J.U., Grayek, S., Schulz-Stellenfleth, J. and Stanev, E.V. (2016) On the impact of salinity observations on state estimates in Ems Estuary, Ocean Dynamics, 66, 243-262.
  161. Guerin, T., Bertin, X., Chaumillon, E., 2016. Wave control on the rhythmic development of a wide estuary mouth sandbank : A process-based modelling study. Marine Geology 380, 79- 89.
  162. Zhang, Y., Ye, F., Stanev, E.V., Grashorn, S. (2016). Seamless cross-scale modeling with SCHISM, Ocean Modelling, 102, 64-81. doi:10.1016/j.ocemod.2016.05.002 proof
  163. Guerin, T., Bertin, X., and Dodet, G. (2016) A numerical scheme for coastal morphodynamic modelling on unstructured grids, Ocean Modelling, 104, 45-53. doi: 10.1016/j.ocemod.2016.04.009.
  164. Zhang, Y., Priest, G.R., Allan, J., Stimely, L. (2016) Benchmarking an unstructured-grid model for tsunami current modeling, Pure and Applied Geophysics, 173, 4075-4087. DOI: 10.1007/s00024-016-1328-6.
  165. Fortunato, A.B; Li, K.; Bertin, X.; Rodrigues, M.; Miguez, B.M. 2016. "Determination of extreme sea levels along the Iberian Atlantic coast", Ocean Engineering 111, 1: 471 - 482. doi: 10.1016/j.oceaneng.2015.11.031
  166. Fabião, J.P. F; Rodrigues, M. F. G; Fortunato, A. B; Jacob, J. M. Q. B; Cravo, A. M. F. 2016. "Water exchanges between a multi-inlet lagoon and the ocean: the role of forcing mechanisms", Ocean Dynamics 66, 2: 173 - 194. doi: 10.1007/s10236-015-0918-7
  167. Mendes, D., Fortunato, A. B., Pires-Silva, A. A. 2016. "Assessment of three dredging plans for a wave-dominated inlet", Maritime Engineering 169, 2: 64 - 75.
  168. Jacob, B., Stanev, E.V., and Zhang, Y. (2016) Local and remote response of the North Sea dynamics to morphodynamic changes in the Wadden Sea, Ocean Dynamics, 66, 671-690.
  169. Zhang, Y., Stanev, E.V. and S. Grashorn (2016) Unstructured-grid model for the North Sea and Baltic Sea: validation against observations, Ocean Modelling, 97, 91-108. pdf
  170. Tavares, Alexandre O; Santos, Pedro P.; Freire, Paula; Fortunato, A.B; Rilo, A.; Sa, L. 2015. "Flooding hazard in the Tagus estuarine area: The challenge of scale in vulnerability assessments", Environmental Science & Policy 51, 1: 238 - 255. doi: 10.1016/j.envsci.2015.04.010
  171. Guerreiro, Martha; Fortunato, A.B; Freire, Paula; Rilo, Ana; Taborda, Rui; Freitas, Maria C; Andrade, Cesar; Silva, Tiago; Rodrigues, Marta; Bertin, Xavier; Azevedo, Alberto. 2015. "Evolution of the hydrodynamics of the Tagus estuary (Portugal) in the 21st century", Revista de Gestão Costeira Integrada, 15: 65 - 80. doi: 10.5894/rgci515
  172. Bertin, Xavier; Fortunato, A.B.; Dodet, Guillaume. 2015. "Processes controlling the seasonal cycle of wave-dominated inlets", Revista de Gestão Costeira Integrada, 15: 9 - 19. doi: 10.5894/rgci524
  173. Perianez R., Brovchenko I.., Duffa C., Jung K.T., Kobayashi T., Lamego F., Maderich V., Min, B.-I., Nies H., Osvath I., Psaltaki M., Suh K. (2015) A new comparison of marine dispersion model performances for Fukushima releases in the frame of IAEA MODARIA program. Journal of Environmental Radioactivity, 150 247-269.
  174. Zhang, Y., Ateljevich, E., Yu, H-C., Wu, C-H., and Yu, J.C.S. (2015) A new vertical coordinate system for a 3D unstructured-grid model, Ocean Modelling, 85, 16-31. pdf
  175. Breilh, J.F., Bertin, X., Chaumillon, E., Giloy, N. and Sauzeau, T. (2014) How frequent is storm-induced flooding in the central part of theBay of Biscay? Global and Planetary Change, 122, 161-175.
  176. Horrillo,H., Grilli, S.T., Nicolsky, D., Roeber, V. and Zhang, Y. (2014) Performance Benchmarking Tsunami Models for NTHMP's Inundation Mapping Activities, Pure and Applied Geophysics, DOI 10.1007/s00024-014-0891-y.
  177. Fortunato, A.B.; Nahon, Alphonse; Dodet, Guillaume; Rita Pires, A; Conceicao Freitas, M; Bruneau, Nicolas; Azevedo, Alberto; Bertin, X.; Benevides, Pedro; Andrade, C.; Oliveira, Anabela. 2014. "Morphological evolution of an ephemeral tidal inlet from opening to closure: The Albufeira inlet, Portugal", Continental Shelf Research 73, -: 49 - 63. doi: 10.1016/j.csr.2013.11.005
  178. Tomas, L.M.; Rodrigues, M.; Fortunato, A.B; Azevedo, Alberto; Leitao, P.C.; Oliveira, Anabela; Rocha, A.; Lopes, J.F.; Dias, J.M.. 2014. "Salinity modelling accuracy of a coastal lagoon: a comparative river flow analysis of basin model vs. traditionnal approaches", Journal of Coastal Research, S.I. 70: 586 - 571.
  179. Boer, S. d; Azevedo, Alberto; Vaz, L.; Costa, R.; Fortunato, A.B.; Oliveira, Anabela; Tomas, L.M.; Dias, J.M.; Rodrigues, M.. 2014. "Development of an oil spill hazard scenarios database for risk assessment", Journal of coastal Research, S.I. 70: 539 - 544.
  180. Bechle, A. J., and Wu, C. H. (2014) The Lake Michigan meteotsunamis of 1954 revisited, Nat. Hazards, 74, 155– 177, doi:10.1007/s11069-014-1193-5.
  181. Oliveira, Anabela; Jesus, G.; Gomes, J.L.; Rogeiro, J.; Azevedo, Alberto; Rodrigues, M.; Fortunato, A.B.; Dias, J.M.; Tomas, L.M.; Vaz, L.; Oliveira, E.R.; Alves, F.L.; Boer, S. d. 2014. "An interactive WebGIS observatory platform for enhanced support of integrated coastal management", Journal of Coastal Research, S.I. 70: 507 - 512.
  182. Science Council of Japan (2014) A review of the model comparison of transportation and deposition of radioactive materials released to the environment as a result of the Tokyo Electric Power Company's Fukushima Daiichi Nuclear Power Plant accident. Available at: SCJ web or pdf.
  183. Pein, J.U., Stanev, E.V., and Zhang. Y. (2014) The tidal asymmetries and residual flows in Ems Estuary, Ocean Dynamics, 64, 1719-41.
  184. Bertin, X., Li, K., Roland, A., Zhang, Y., Breilh, J.F. and Chaumillon, E. (2014) A modeling-based analysis of the flooding associated with Xynthia, central Bay of Biscay, Coastal Eng, 94,80-89.
  185. Wang, H.V. Loftis, J.D., Liu, Z., Forrest, D. and Zhang, Y.J. (2014) The storm surge and sub-grid inundation modeling in New York City during Hurricane Sandy, Journal of Marine Science and Engineering, 2(1), 226-246.
  186. Azevedo, A., Oliveira, A., Fortunato, A.B., Zhang, Y. and Baptista, A.M. (2014) A cross-scale numerical modeling system for management support of oil spill accidents, Marine Pollution Bulletin, 80, 132-147.
  187. Priest, G.R., Zhang, Y., Witter, R.C., Wang, K., Goldfinger, C. and Stimeley, L. (2014) Tsunami impact to Washington and northern Oregon from segment ruptures on the southern Cascadia subduction zone, Natural Hazards, 72(2), 849-870.
  188. Witter, R.C., Y. Zhang, Wang, K., Priest, G.R., Goldfinger, C., Stimely, L., English, J.T. and Ferro, P.A. (2013) Simulated tsunami inundation for a range of Cascadia megathrust earthquake scenarios at Bandon, Oregon, USA, Geosphere, 9, 1783-1803.
  189. Dodet, G., X. Bertin, N. Bruneau, A. B. Fortunato, A. Nahon, and A. Roland (2013), Wave-current interactions in a wave-dominated tidal inlet, J. Geophys. Res. Oceans, 118, 15871605, doi: 10.1002/jgrc.20146.
  190. Chen, C., et al. (2013), Extratropical storm inundation testbed: Intermodel comparisons in Scituate, Massachusetts, J. Geophys. Res. Oceans, 118, 5054-5073, doi:10.1002/jgrc.20397.
  191. Kerr, P. C., et al. (2013), U.S. IOOS coastal and ocean modeling testbed: Inter-model evaluation of tides, waves, and hurricane surge in the Gulf of Mexico, J. Geophys. Res. Oceans, 118, 5129-5172, doi:10.1002/jgrc.20376.
  192. A.B. Fortunato, M. Rodrigues, J.M. Dias, C. Lopes, A. Oliveira (2013) Generating inundation maps for a coastal lagoon: A case study in the Ria de Aveiro (Portugal), Ocean Engineering, Volume 64, 60-71.
  193. Roland, A., Zhang, Y., Wang, H.V., Meng, Y., Teng, Y., Maderich, V., Brovchenko, I., Dutour-Sikiric, M. and Zanke, U. (2012) A fully coupled wave-current model on unstructured grids, Journal of Geophysical Research-Oceans,117,C00J33,doi:10.1029/2012JC007952.
  194. Wang, D., Li, Y. and Lan, J. (2013) Spatial differentiation of coral species related to wave energy along the Changqi coast, Hainan island, southern China, Continental Shelf Research, 57, pp. 117 - 122.
  195. Jun Kong, Pei Xin, Chenji Shen, Zhiyao Song, Ling Li, 2013. A High-resolution method for the depth-integrated solute transport equation based on an unstructured mesh. Environmental Modeling & Software, 40,109-127.
  196. NTHMP (2012) Proceedings and results of the 2011 NTHMP (National Tsunami Hazard Mitigation Program) model benchmarking workshop. Boulder: US Depart. of Commerce/NOAA/NTHMP, NOAA Special Report 436p.
  197. Witter, R.C, Zhang, Y., Wang, K., Goldfinger, C., Priest, G.R., Allan, J.C. (2012) Coseismic slip on the Cascadia megathrust implied by tsunami deposits in an Oregon lake. Journal of Geophysical Research-Solid Earth, 117, B10303, doi:10.1029/2012JB009404.
  198. Pinto, L., Fortunato, A.B., Zhang, Y., Oliveira, A. and Sancho, F.E.P. (2012) Development and validation of a three-dimensional morphodynamic modelling system, Ocean Modelling, Volumes 57-58, 1-14.
  199. Cho, K.H. Wang, H.V., Shen, J., Valle-Levinson, A. and Teng, Y.C. (2012) A modeling study on the response of the Chesapeake Bay to Hurricane Events of Floyd and Isabel. Ocean Modeling, vol. 49-50, pp. 22-46.
  200. Witter, R.C., Jaffe, B., Zhang, Y. and Priest, G.R. (2011) Reconstructing hydrodynamic flow parameters of the 1700 tsunami at Cannon Beach, Oregon, USA., Natural Hazards, DOI 10.1007/s11069-011-9912-7.
  201. Rodrigues, M., Oliveira, A., Queiroga, H., Brotas, V. (in press). Seasonal and diurnal water quality modelling along a salinity gradient (Mira channel, Aveiro lagoon, Portugal), Procedia Environmental Science.
  202. Bertin, X., Bruneau, N., Breilh, J.F., Fortunato, A.B. and Karpytchev, M. (2012) Importance of wave age and resonance in storm surges: the case Xynthia, Bay of Biscay, Ocean Modelling, 42, pp. 16-30.
  203. Brovchenko I., Maderich V. (2011) Study of the role of underwater canyons in sediment transport from the Black Sea east coast. International Journal for Computational Civil and Structural Engineering, 7(2), 39-46.
  204. A. Nahon; X. Bertin, A.B. Fortunato, A. Oliveira (2012). A modeling-based assessment of tidal inlet classification, Marine Geology, vol. 291-294, pp. 1 - 11.
  205. C.L. Lopes, P.A. Silva, J.M. Dias, A. Rocha, A.T. Picado, S. Plecha, A.B. Fortunato, 2011. Local sea level rise scenarios for the end of the 21st century and potential physical impacts in the lower Ria de Aveiro (Portugal), Continental Shelf Research, 31/14: 1515-1526
  206. Picado, P. A. Silva, A. B. Fortunato and J. M. Dias. 2011. Particle tracking-modeling of morphologic changes in the Ria de Aveiro, J. Coastal Res., SI64, 1560-1564.
  207. Zhang, Y., Witter, R.W. and Priest, G.P. (2011) Tsunami-Tide Interaction in 1964 Prince William Sound Tsunami, Ocean Modelling, 40, 246-259.
  208. A.B. Fortunato, N. Bruneau, A. Azevedo, M.A.V.C. Araúnd A. Oliveira. 2011. Automatic improvement of unstructured grids for coastal simulations J. Coastal Res., SI64, 1028-1032.
  209. A. Nahon, A. B. Fortunato, X. Bertin, A. R. Pires, A. Oliveira, M.C. Freitas, C. Andrade. 2011. Numerical modelling of opening and closure of an artificial inlet (Santo Andréagoon, Portugal). Revista GestãCosteira Integrada, 11/3: 341-353
  210. J. Rosa, D. Gonçves, P.A. Silva, L.M. Pinheiro, L. Rebê, A.B. Fortunato, X Bertin. 2011. Sand Extraction Evolution Area offshore Vale do Lobo (Algarve, Portugal) - comparison between numerical results and bathymetric data, Revista GestãCosteira Integrada, 11/3: 369-377.
  211. N. Bruneau, A.B Fortunato, G. Dodet, P. Freire, A. Oliveira, X. Bertin, 2011. Future evolution of a tidal inlet due to changes in wave climate, sea level and lagoon morphology (Óidos Lagoon, Portugal), Continental Shelf Research, 31/18: 1915-1930
  212. N. Bruneau, G. Dodet, X. Bertin and A. B. Fortunato. 2011. Development of a three-dimensional coupled wave-current model for coastal environments, J. Coastal Res., SI64, 986-990.
  213. J. Rosa, P. A. Silva, X. Bertin and A. B. Fortunato.2011. Waves, wind and tidal forcing on a sandpit morphodynamics, J. Coastal Res., SI64, 1070-1074.
  214. M. Rodrigues, A. Oliveira, M. Guerreiro, A.B. Fortunato, J. Menaia, L.M. David & A. Cravo. 2011. Modeling fecal contamination in the Aljezur coastal stream (Portugal), Ocean Dynamics, 61:841.856.
  215. Oliveira, M. Rodrigues, A.B. Fortunato and M. Guerreiro. 2011. Impact of seasonal bathymetric changes and inlet morphology on the 3D water renewal and residence times of a small coastal stream, J. Coastal Res., SI64, 1555-1559.
  216. Picado, A., Dias, J.M. and Fortunato, A.B. 2010. Tidal changes in estuarine systems induced by local geomorphologic modifications, Continental Shelf Res., 30/17: 1854-1864.
  217. Plecha, S., P.A. Silva, N. Vaz, X. Bertin, A. Oliveira, A.B. Fortunato and J.M. Dias. 2010. Sensitivity analysis of a morphodynamic modelling system applied to a coastal lagoon inlet, Ocean Dynamics, 60/2: 275-284.
  218. Jun Kong, Pei Xin, Zhi-yao Song, Ling Li (2010) A new model for coupling surface and subsurface water flows: With an application to a lagoon. Journal of Hydrology,390:116-120.
  219. Priest, G.R., Goldfinger, C., Wang, K., Witter, R.C., Zhang, Y., Baptista, A.M. (2010) Confidence levels for tsunami-inundation limits in northern Oregon inferred from a 10,000-year history of great earthquakes at the Cascadia subduction zone. Natural Hazards, 54(1), 27-73.
  220. Burla, M., Baptista, A.M. Zhang, Y., and Frolov, S. (2010) Seasonal and inter-annual variability of the Columbia River plume: a perspective enabled by multi-year simulation databases. Journal of Geophysical Research: special issue on NSF RISE project, 115, C00B16.
  221. Frolov, S., Baptista, A.M., Zhang, Y., and Seaton, C. (2009) Estimation of Ecologically Significant Circulation Features of the Columbia River Estuary and Plume Using a Reduced-Dimension Kalman Filter. Continental Shelf Research, 29(2), 456-466.
  222. Gong, W., Shen, J., Cho, K.H. and Wang, H.V. (2009) A numerical model study of barotropic subtidal water exchange between estuary and subestuaries (tributaries) in the Chesapeake Bay during northeaster events, Ocean Modelling, 26(3-4), 170-189.
  223. Bertin, X., A. Oliveira and A.B. Fortunato (2009). Simulating morphodynamics with unstructured grids: description and validation of an operational model for coastal applications, Ocean Modelling, 28(1-3): 75-87.
  224. Fortunato, A.B., X. Bertin and A. Oliveira (2009) Space and time variability of uncertainty in morphodynamic simulations, Coastal Engineering, 56(8): 886-894 .
  225. Azevedo, A., A. Oliveira, A.B. Fortunato and X. Bertin (2009) Application of an Eulerian-Lagrangian oil spill modeling system to the Prestige accident: trajectory analysis, J. Coastal Research, SI56: 777-781.
  226. Bertin, X., A.B. Fortunato and A. Oliveira (2009) A modeling-based analysis of processes driving wave-dominated inlets, Continental Shelf Research, 29(5-6): 819-834.
  227. Bertin, X., A.B. Fortunato and A. Oliveira (2009) Morphodynamic modeling of the Ancão Inlet, South Portugal, J. Coastal Research, SI56: 10-14.
  228. Dias, J.M., M.C. Sousa, X. Bertin, A.B. Fortunato and A. Oliveira (2009) Numerical modeling of the impact of the Ancão Inlet relocation (Ria Formosa, Portugal), Environmental Modeling and Software, 24: 711-725.
  229. Lopes, V., P.A. Silva, X. Bertin, A.B. Fortunato and A. Oliveira (2009) Impact of a dredged sandpit on tidal and wave hydrodynamics, J. Coastal Research, SI56: 529-533.
  230. Picado, A., J.M. Dias, A.B. Fortunato (2009) Effect of flooding the salt pans in the Ria de Aveiro, J. of Coastal Research, SI56, 1395-1399.
  231. Rodrigues, M., A. Oliveira, M. Costa, A.B. Fortunato and Y.J. Zhang (2009) Sensitivity analysis of an ecological model applied to the Ria de Aveiro, J. Coastal Research, SI56, 448-452.
  232. Rodrigues, M., A. Oliveira, H. Queiroga, A.B. Fortunato and Y.J. Zhang (2009) Three-Dimensional Modeling of the Lower Trophic Levels in the Ria de Aveiro (Portugal), Ecological Modelling, 220, 1274-1290.
  233. Zhang, Y., and Baptista, A.M. (2008) An Efficient and Robust Tsunami Model on Unstructured Grids. Part I: Inundation Benchmarks. Pure and Applied Geophysics: Topical issue on Tsunamis, vol. 165, pp. 1-20.
  234. Frolov, S., A.M. Baptista, M. Wilkin, (2008). Optimizing Placement of Fixed Observational Sensors in a Coastal Observatory, Continental Shelf Research, 28(19) 2644-2659.
  235. Zhang, Y. and Baptista, A.M. (2008) "SELFE: A semi-implicit Eulerian-Lagrangian finite-element model for cross-scale ocean circulation", Ocean Modelling, 21(3-4), 71-96. pdf
  236. C.F.Wang, H.V. Wang, and A.Y. Kuo (2008) Mass Conservative Transport Scheme for the Application of the ELCIRC Model to Water Quality Computation. Journal of Hydraulic Engineering, ASCE, 1166.
  237. A.B. Fortunato and A. Oliveira. 2007. Case study: Promoting the stability of the Obidos Lagoon Inlet. J. Hydraulic Eng., 133(7): 816-824.
  238. Fortunato, A.B. and A. Oliveira (2007) Improving the stability of a morphodynamic modeling system, Journal of Coastal Research, SI50: 486-490.
  239. Oliveira, A., A.B. Fortunato, M. Rodrigues and A. Azevedo (2007) Integration of physical and water quality models, Houille Blanche, 4: 40-46.
  240. Oliveira, A., A.B. Fortunato and L. Pinto, 2006. Modeling the Hydrodynamics and the Fate of Passive and Active Tracers in the Guadiana Estuary, Estuarine, Coastal and Shelf Science, 70, 76-84.
  241. Oliveira, A., A.B. Fortunato and J. Rego, (2006). Effect of Morphological Changes on the Hydrodynamics and Flushing Properties of the Óbidos lagoon, Continental Shelf Research, 26, 917-942.
  242. Foreman, M.G.G., Stucchi, D., Zhang, Y. and Baptista, A.M. 2005 "Estuarine and tidal currents in the Broughton Archipelago", Atmospherie-Ocean, 44(1): 47-63.
  243. Baptista, A.M., Zhang, Y., Chawla, A., Zulauf, M.A., Seaton, C., Myers, E.P., Kindle, J., Wilkin, M., Burla, M. and Turner, P.J. 2005 "A cross-scale model for 3D baroclinic circulation in estuary-plume-shelf systems: II. Application to the Columbia River". Continental Shelf Research, 25, 935-972.
  244. Pinto, L.L., A.B. Fortunato, A. Oliveira and A.M. Baptista, 2004. Haline stratification in the Guadiana estuary. II ? Numerical modeling, Recursos Hídricos, 25/2: 99-110. (in Portuguese)
  245. Zhang, Y., Baptista, A.M. and Myers, E.P. (2004) "A cross-scale model for 3D baroclinic circulation in estuary-plume-shelf systems: I. Formulation and skill assessment". Cont. Shelf Res., 24: 2187-2214. pdf files: pdf